BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB038H11SP1|AL430628
(924 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1727 1811 0.0
>3x_Contig1727
Length = 17872
Score = 1811 bits (913), Expect = 0.0
Identities = 921/923 (99%), Gaps = 1/923 (0%)
Strand = Plus / Minus
Query: 1 gatcaaatgatctcttaacagttaccagatgctctttagctgctgtaas-tttgataagg 59
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 6530 gatcaaatgatctcttaacagttaccagatgctctttagctgctgtaagctttgataagg 6471
Query: 60 tttcagttacctcattactgtcttcatatttagaattcagctcttctaattgtttatcaa 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6470 tttcagttacctcattactgtcttcatatttagaattcagctcttctaattgtttatcaa 6411
Query: 120 tagctttaacgtctgtctctaataagttcacactattcgctagagtatccaaataatact 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6410 tagctttaacgtctgtctctaataagttcacactattcgctagagtatccaaataatact 6351
Query: 180 ctagttttgttgttccttgctgttcctcatttgctgcgtatataataagttcagcaggct 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6350 ctagttttgttgttccttgctgttcctcatttgctgcgtatataataagttcagcaggct 6291
Query: 240 tctgaagcacctgaatagtggactcaagttcttttgtaatatgcccactgtaatagtcca 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6290 tctgaagcacctgaatagtggactcaagttcttttgtaatatgcccactgtaatagtcca 6231
Query: 300 tttttgaaagtagactagagcaattggtcttcaattcttctaattggcttgtctggaaag 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6230 tttttgaaagtagactagagcaattggtcttcaattcttctaattggcttgtctggaaag 6171
Query: 360 atgataacaatatgtcgacgaatgcttgaggtacaaaatcatcatcgaaaaacatgtcta 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6170 atgataacaatatgtcgacgaatgcttgaggtacaaaatcatcatcgaaaaacatgtcta 6111
Query: 420 gcaaagggtcattagcaccagatatccttctactcatcgtgtaggaaattatagtgctat 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6110 gcaaagggtcattagcaccagatatccttctactcatcgtgtaggaaattatagtgctat 6051
Query: 480 atcgtccttcaaaggtgatttggtggcttacttgggtgtttcatgatcatcatatttaga 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6050 atcgtccttcaaaggtgatttggtggcttacttgggtgtttcatgatcatcatatttaga 5991
Query: 540 ggtagaaggttaacttcttcattttgatgttaagatttcaagatgatttttggtgccttc 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5990 ggtagaaggttaacttcttcattttgatgttaagatttcaagatgatttttggtgccttc 5931
Query: 600 agatgcacagtaagaaaggtttaaaagagaaggatacaatatcaaagcagatattactat 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5930 agatgcacagtaagaaaggtttaaaagagaaggatacaatatcaaagcagatattactat 5871
Query: 660 acacattgatgagagcaacgtatggataatttattggactatatatgggtataattctat 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5870 acacattgatgagagcaacgtatggataatttattggactatatatgggtataattctat 5811
Query: 720 ttacaattctattgcttctcttttagactggacgacaaatcagtatttcaatagcatacc 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5810 ttacaattctattgcttctcttttagactggacgacaaatcagtatttcaatagcatacc 5751
Query: 780 attttttccgacgcaccaaacattttgatgtgattcatcaacacagaaatcagtcacttc 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5750 attttttccgacgcaccaaacattttgatgtgattcatcaacacagaaatcagtcacttc 5691
Query: 840 atcataaggacgaattagatgtgtaagcttattgaaattgaatttcccgtccaaaacagg 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5690 atcataaggacgaattagatgtgtaagcttattgaaattgaatttcccgtccaaaacagg 5631
Query: 900 tacattgaaagcaaattggaccc 922
|||||||||||||||||||||||
Sbjct: 5630 tacattgaaagcaaattggaccc 5608
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8000
Number of Sequences: 1807
Number of extensions: 8000
Number of successful extensions: 50
Number of sequences better than 1.0e-20: 1
length of query: 924
length of database: 10,358,551
effective HSP length: 16
effective length of query: 908
effective length of database: 10,329,639
effective search space: 9379312212
effective search space used: 9379312212
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)